André Pedersen

Brattørkaia 17A

7010 Trondheim

Trøndelag, Norway

Hi! I’m a Senior AI Engineer at DIPS AS. I have strong experience in using artificial intelligence and image analysis techniques for various medical applications, aiming to develop solutions that can assist clinicians in their daily practice. Currently, my main focus is on using generative AI and large multimodal models to solve various problems in the industry.

I was a MSc student at the Arctic University of Norway (UiT), from August 2014 to June 2019, in applied physics and mathematics, specializing in machine learning and statistics. I completed a summer internship at SINTEF Digital in 2018, which I ended up collaborating with on my Master’s thesis. From January 2019, I worked part-time at SINTEF while finishing my degree.

I started my PhD fellowship October 2019 in collaboration with the same research group as for my Master’s thesis. I was a PhD Candidate until 2023, where I published several papers on computational pathology, while I also held a position as a Research Scientist at the Medical Image Analysis group at SINTEF. I successfully defended my PhD November 2024.

In parallel to my PhD work, I have developed open, standalone software for C++ and Python, mainly using Qt5/PySide6 (e.g., FastPathology and Raidionics). I have published open command line tools (e.g., livermask), developed Python packages (e.g., gradient-accumulator, torchstain), and published articles to high-impact scientific journals related to medical image analysis and deep learning (on topics such as image classification, semantic segmentation, image-to-image registration, high-performance computing, semi-supervised learning, and natural language processing).

I have also written a book chapter and acted as a reviewer for scientific journals, such as Medical Image Analysis, Nature Scientific Reports, Frontiers in Medicine, IJCARS, QIMS, and BMC Medical Imaging. Lastly, I have (co-)supervised five Master’s students working on using deep learning for supervised/semi-supervised segmentation of 3D medical images (CT), multilabel histopathology image classification, and bronchoscopy video navigation.

news

May 20, 2025 Research article presenting DRU-Net for lung cancer classification in whole slide images has been published in the Journal of Imaging. Available here.
May 1, 2025 Started as a Senior AI Engineer at DIPS AS. For announcement, see here.
Jan 17, 2025 Clinical research article published in the Journal of Neurosurgery. Available here.
Nov 15, 2024 Officially a Doctor! Successfully defended my PhD in Medical Technology!
Oct 2, 2024 AeroPath paper published in PLOS ONE (see here). Paper, annotated dataset, trained models, demo web app, and source code are all made openly available (see here).
May 12, 2024 Achieved a certification in Machine Learning in Production from DeepLearning.AI. See the certificate here.

today's publication

  1. Cancers
    Glioblastoma Surgery Imaging—Reporting and Data System: Standardized Reporting of Tumor Volume, Location, and Resectability Based on Automated Segmentations
    Ivar Kommers, David Bouget,  André Pedersen, Roelant Eijgelaar, Hilko Ardon, Frederik Barkhof, Lorenzo Bello, Mitchel Berger, Marco Conti Nibali, Julia Furtner, Even Fyllingen, Shawn Hervey-Jumper, Albert Idema, Barbara Kiesel, Alfred Kloet, Emmanuel Mandonnet, Domenique Müller, Pierre Robe, Marco Rossi, and Philip De Witt Hamer
    Cancers Jun 2021